If its a new store-bought PC3USB then it was probably all plug-and-play including the TPS plug. On the other hand, if your PC3 had any wires without plugs (except the ground wire) and you had a crimp-on wire connector at the TPS (right side between the jugs) then let us know and we can help you to 'Perfect Install' the PC3.
You'll want to do these things:
1. Clean air filters.
2. Clean and adjust spark plug gaps.
3. Be sure plug wires are firmly installed onto the spark plugs.
4. Be sure coil primary wires are gently but firmly installed onto their tabs.
5. Start the bike and get it fully warm (ride 5 minutes or idle similar time).
6. Set the warm idle to 850~950 rpm (use the PowerCommander software and a laptop if possible).
7. Set the "Closed" (Zero % Throttle) at warm idle to zero (see this link - use Tutorial 10) (ignore setting 100% throttle its already set):
http://www.powercommander.com/powercommander/Downloads/powercommander_iii_usb_downloads.aspx
That'll do it.